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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914891.1_cds_XP_016464837.1_57842
CDS Infomation

[gene=LOC107787735] [db_xref=GeneID:107787735] [protein=E3 ubiquitin-protein ligase CHFR-like isoform X2] [protein_id=XP_016464837.1] [location=join(6590..7068,7211..7439,7605..7750,7893..7980,8113..8256,8591..8620)] [gbkey=CDS]
Sequence

ATGAAACCTGTTTGCCCTTTTGTTAGAGCTTCCAGACCTGATGACACTTCTACTAAGAAG
CCTGGTGAAAACCAAAATAAACAGCCGGCTAGTCAGGAGAGCAAGCCTAAGCAAGAGTCT
AGGGAATCTGCAATTGTGTCACCTAAATGCCCCTTTGGATATGGCCAGGAGAGCAAGCCT
AAGCAAGAGTCTAGGGAATCTGCAATTGTGTCACCTAAATGCCCCTTTGGATATGGCCAG
GAGAGCAAGCCTAAAGAAGCGTCTGGAGAATCTGCAGTTGTGTCACCTCAATGCCCCTTT
GGATATGGCCAGGAGAACAAGGCTAAACAAGAGTCTGGAGAATCTGCAACTGTGTCACCT
AAATGCCCCTTTGGATATGATTCTCAAGCATTTAAGCTGGGTCCTTTTAGCTGCATGATT
TGTCAGGCACTTCTTTATGATTGCAGCAGATGTGTGCCCTGTTCTCATGTATTCTGCAAA
GCATGTCTCTTGCGCTTTAAGGACTGTCCTTTATGTGGGGCTGATATCGAAAAGATAGAG
AGTGATATGAATCTTCAGAATGTTGTTGATCGCTTTATTGAAGGGCATGCGAGGATTAAG
AGGTCTCAGGTTAATGGTGACGAAAAAGAAGCAGAAGAGAGAAAAACTGTTATGTACGAG
GATGTATCACTAGAACGGGGAGCTTTCCTGGTGCAACAAGCCATGCGGGCTTTTCGTGCC
AAAAATATCGACAGTGCAAAATCAAGACTTACTATGTGCGCAGATGATATTCGAGGACAG
CTAGAAAGGCTGGGAAATACATCCGAGTTGTGCTCACAGCTTGGAGCGGTCCTTGGTATG
CTTGGTGATTGCTGTCGAGCAACAGGGGATGCTGCATCTGCAGTCACTTACTTTGAAGAG
AGTGTCAATTTCCTTGTGAAAGTGCCCAAAGATGATTTAGAGATCACACATACTCTTTCT
GTTTCGCTTAATAAAATTGGAGATCTTAAGTACTATGATGATGATTTAGAAGCTGCAAGA
TCACATTACTTTAAGGCGTTGGATGTTCGCCGCAATGCCATCAAACAACAGTCTGCACCA
TCTCAGGTTAAAAGGGGAAATAACTGTAAATTGTGA

Peptide Sequence

PEP ID

XP_016464837.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase CHFR-like isoform X2 [Nicotiana tabacum]
Sequence

MKPVCPFVRASRPDDTSTKKPGENQNKQPASQESKPKQESRESAIVSPKCPFGYGQESKP
KQESRESAIVSPKCPFGYGQESKPKEASGESAVVSPQCPFGYGQENKAKQESGESATVSP
KCPFGYDSQAFKLGPFSCMICQALLYDCSRCVPCSHVFCKACLLRFKDCPLCGADIEKIE
SDMNLQNVVDRFIEGHARIKRSQVNGDEKEAEERKTVMYEDVSLERGAFLVQQAMRAFRA
KNIDSAKSRLTMCADDIRGQLERLGNTSELCSQLGAVLGMLGDCCRATGDAASAVTYFEE
SVNFLVKVPKDDLEITHTLSVSLNKIGDLKYYDDDLEAARSHYFKALDVRRNAIKQQSAP
SQVKRGNNCKL

Transcript Sequence

Gene sequence data has not been registered.